Why the two get confused
The confusion mostly comes from casual speech -- people say "set a timer" for a stopwatch task and vice versa. The functional difference is direction: a stopwatch has no predetermined endpoint and just accumulates elapsed time, while a timer is built around a target duration you have already decided on.
Combining both in one session
A common pattern is using a countdown timer to enforce a work block and a stopwatch to log how long the actual task took within it -- useful for noticing when your estimates for a task are consistently off from reality.
Frequently Asked Questions
Can I use a countdown timer as a stopwatch by counting down from a huge number?
Technically, but it defeats the purpose -- you'd have to do subtraction afterward to know the elapsed time. A stopwatch already displays elapsed time directly, so it's the simpler tool when you don't know the duration up front.
Why do interval workouts usually use a timer instead of a stopwatch?
Interval training is built around fixed, pre-decided work and rest durations repeated for several rounds, which is exactly what a countdown timer with repeat/round settings is designed for -- a stopwatch would require you to watch the clock and switch phases manually.